Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 AC107918.2-201ENST00000530817 355 ntBASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 DUX4L17-201ENST00000557360 1267 ntBASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX49Q9Y6V7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 AC004461.1-201ENST00000412461 403 ntBASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 AC068137.2-201ENST00000605408 478 ntBASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 AC007064.4-201ENST00000637740 555 ntBASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX49Q9Y6V7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms