Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AL589702.1-201ENST00000641229 1509 ntBASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 PCDHA1-201ENST00000378133 2726 ntBASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 AC022188.1-201ENST00000620960 1664 ntBASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHB1Q9Y5F3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 AC092580.3-201ENST00000430932 139 ntBASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 AC008267.7-201ENST00000624570 1194 ntBASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 AC084121.4-201ENST00000641598 221 ntBASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 AF228730.8-201ENST00000642140 221 ntBASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB1Q9Y5F3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHB1Q9Y5F3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHB1Q9Y5F3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHB1Q9Y5F3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms