Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 AC105917.1-201ENST00000506637 2539 ntBASIC17.45■□□□□ 0.38
USP15Q9Y4E8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 CETN4P-206ENST00000642099 2168 ntBASIC17.45■□□□□ 0.38
USP15Q9Y4E8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP15Q9Y4E8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 AC132938.2-201ENST00000579188 680 ntBASIC17.44■□□□□ 0.38
USP15Q9Y4E8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 AL591163.1-201ENST00000641757 987 ntBASIC17.44■□□□□ 0.38
USP15Q9Y4E8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP15Q9Y4E8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 HLA-H-201ENST00000383620 1096 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 RPL37AP1-201ENST00000412502 279 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 AL353705.2-201ENST00000428243 662 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 MTND6P24-201ENST00000440466 518 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 GNAQP1-201ENST00000444815 1067 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 AC104794.3-201ENST00000566840 1248 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 AL589739.1-201ENST00000607720 493 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 MIR6805-201ENST00000615055 62 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 AC068418.2-201ENST00000577309 3703 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 LINC02012-201ENST00000608206 1725 ntBASIC17.43■□□□□ 0.38
USP15Q9Y4E8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
USP15Q9Y4E8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP15Q9Y4E8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP15Q9Y4E8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
USP15Q9Y4E8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms