Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 AL589702.1-201ENST00000641229 1509 ntBASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 DFFBP1-201ENST00000433250 979 ntBASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 PCDHB17P-201ENST00000539533 2393 ntBASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX2IPQ9Y2D8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 AC092068.3-201ENST00000587894 2016 ntBASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 OR8S1-201ENST00000310194 1080 ntBASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX2IPQ9Y2D8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 AC093004.1-201ENST00000508850 424 ntBASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 AC004840.1-201ENST00000636359 365 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms