Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PRSS29P-201ENST00000440800 595 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AC009078.2-202ENST00000463353 338 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AC108751.1-201ENST00000490852 363 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AC079776.4-201ENST00000511039 504 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 MIR4751-201ENST00000578027 74 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 SLC25A6P4-201ENST00000586535 553 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AC010654.1-201ENST00000615722 808 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AC131009.4-201ENST00000624048 1740 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 CICP24-201ENST00000605464 2705 ntBASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 HLA-A-201ENST00000376802 1334 ntBASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC005089.1-201ENST00000619486 2241 ntBASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 CRYGEP-201ENST00000412192 528 ntBASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms