Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SPDYE17-201ENST00000412399 783 ntBASIC14.82□□□□□ -0.04
LRFN1Q9P244 SPTLC1P1-201ENST00000447199 261 ntBASIC14.82□□□□□ -0.04
LRFN1Q9P244 CRB3P1-201ENST00000449338 276 ntBASIC14.82□□□□□ -0.04
LRFN1Q9P244 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AL512361.1-201ENST00000554200 418 ntBASIC14.82□□□□□ -0.04
LRFN1Q9P244 AC010336.2-201ENST00000564226 506 ntBASIC14.82□□□□□ -0.04
LRFN1Q9P244 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 MIR6069-201ENST00000620069 79 ntBASIC14.82□□□□□ -0.04
LRFN1Q9P244 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AL033527.5-202ENST00000641632 1098 ntBASIC14.82□□□□□ -0.04
LRFN1Q9P244 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.81□□□□□ -0.04
LRFN1Q9P244 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 ZNF890P-202ENST00000530367 1156 ntBASIC14.81□□□□□ -0.04
LRFN1Q9P244 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 AC004840.1-201ENST00000636359 365 ntBASIC14.81□□□□□ -0.04
LRFN1Q9P244 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LRFN1Q9P244 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRFN1Q9P244 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LRFN1Q9P244 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LRFN1Q9P244 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRFN1Q9P244 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRFN1Q9P244 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRFN1Q9P244 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRFN1Q9P244 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRFN1Q9P244 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRFN1Q9P244 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.8□□□□□ -0.04
LRFN1Q9P244 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LRFN1Q9P244 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRFN1Q9P244 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms