Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 AC087388.1-201ENST00000571370 1112 ntBASIC14.81□□□□□ -0.04
CLN6Q9NWW5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 AP000550.4-202ENST00000639755 178 ntBASIC14.81□□□□□ -0.04
CLN6Q9NWW5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 AC138035.3-201ENST00000622706 2791 ntBASIC14.81□□□□□ -0.04
CLN6Q9NWW5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN6Q9NWW5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 PI4KAP1-204ENST00000612579 1703 ntBASIC14.8□□□□□ -0.04
CLN6Q9NWW5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 RBM17P3-201ENST00000417687 1192 ntBASIC14.8□□□□□ -0.04
CLN6Q9NWW5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 NKAPP1-205ENST00000585790 367 ntBASIC14.8□□□□□ -0.04
CLN6Q9NWW5 AC069148.1-201ENST00000608741 768 ntBASIC14.8□□□□□ -0.04
CLN6Q9NWW5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 AC008677.1-201ENST00000519230 1561 ntBASIC14.8□□□□□ -0.04
CLN6Q9NWW5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLN6Q9NWW5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 ARMC10P1-201ENST00000313754 855 ntBASIC14.79□□□□□ -0.04
CLN6Q9NWW5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.79□□□□□ -0.04
CLN6Q9NWW5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms