Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OR6D1P-203ENST00000641209 4860 ntBASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 SPDYE7P-202ENST00000420373 878 ntBASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 HIST3H2BA-201ENST00000436555 524 ntBASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 MIR4313-201ENST00000580760 101 ntBASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 AC006538.3-201ENST00000612495 578 ntBASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 Z92544.3-201ENST00000624747 417 ntBASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.88■□□□□ 0.45
BLOC1S4Q9NUP1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 PKD1P1-201ENST00000458669 6805 ntBASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BLOC1S4Q9NUP1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms