Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
CTNNBIP1Q9NSA3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTNNBIP1Q9NSA3 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 AC136632.2-201ENST00000512891 861 ntBASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 AC021087.4-201ENST00000563761 564 ntBASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 MIR4515-201ENST00000584082 81 ntBASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 AC008667.4-201ENST00000607370 168 ntBASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 AC136621.1-201ENST00000624017 2304 ntBASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTNNBIP1Q9NSA3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 AC087481.3-201ENST00000602886 1894 ntBASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 PMS2P4-201ENST00000412466 1052 ntBASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 KRT18P31-201ENST00000506277 1292 ntBASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 MIR3652-201ENST00000579335 131 ntBASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 LINC01711-201ENST00000598340 967 ntBASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTNNBIP1Q9NSA3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CTNNBIP1Q9NSA3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CTNNBIP1Q9NSA3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms