Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS4Q9NQG7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.71■□□□□ 0.27
HPS4Q9NQG7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.71■□□□□ 0.27
HPS4Q9NQG7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HPS4Q9NQG7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
HPS4Q9NQG7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HPS4Q9NQG7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.71■□□□□ 0.26
HPS4Q9NQG7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HPS4Q9NQG7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 AL391825.1-201ENST00000457671 1364 ntBASIC16.7■□□□□ 0.26
HPS4Q9NQG7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 AC093004.1-201ENST00000508850 424 ntBASIC16.7■□□□□ 0.26
HPS4Q9NQG7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 IGHV3-72-202ENST00000621503 303 ntBASIC16.7■□□□□ 0.26
HPS4Q9NQG7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HPS4Q9NQG7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 AC106886.4-201ENST00000623557 2502 ntBASIC16.69■□□□□ 0.26
HPS4Q9NQG7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 AC006538.1-201ENST00000567905 1585 ntBASIC16.69■□□□□ 0.26
HPS4Q9NQG7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 AC087499.6-201ENST00000411576 835 ntBASIC16.69■□□□□ 0.26
HPS4Q9NQG7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 SRD5A3P1-201ENST00000603021 949 ntBASIC16.69■□□□□ 0.26
HPS4Q9NQG7 AC008494.3-201ENST00000606615 944 ntBASIC16.69■□□□□ 0.26
HPS4Q9NQG7 AC004461.2-201ENST00000629517 803 ntBASIC16.69■□□□□ 0.26
HPS4Q9NQG7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 UBALD1-205ENST00000590891 2641 ntBASIC16.69■□□□□ 0.26
HPS4Q9NQG7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms