Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 AC006277.1-201ENST00000624348 1610 ntBASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.18□□□□□ -0.14
C12orf4Q9NQ89 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 TERC-201ENST00000602385 541 ntBASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 IER3-202ENST00000376377 1350 ntBASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 AC073869.1-201ENST00000415574 2762 ntBASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C12orf4Q9NQ89 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 PCED1CP-201ENST00000419887 785 ntBASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 AL049597.2-201ENST00000565575 961 ntBASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 AC012615.1-201ENST00000565797 1299 ntBASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C12orf4Q9NQ89 AC073347.1-201ENST00000421633 2643 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms