Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AC092580.3-201ENST00000430932 139 ntBASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AC241585.1-201ENST00000433527 519 ntBASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 BCRP1-201ENST00000444246 691 ntBASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AL512638.1-201ENST00000457493 794 ntBASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 INGX-202ENST00000489074 768 ntBASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 BANF1P1-201ENST00000553684 263 ntBASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 CYP2T1P-202ENST00000641596 2535 ntBASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MKKSQ9NPJ1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AC068587.6-202ENST00000641839 5619 ntBASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AL139010.1-201ENST00000454878 894 ntBASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AL138828.2-201ENST00000615812 383 ntBASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AJ011932.1-201ENST00000621707 465 ntBASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MKKSQ9NPJ1 AC018695.7-201ENST00000624587 2492 ntBASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MKKSQ9NPJ1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms