Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.31■□□□□ 0.2
VPS11Q9H270 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 AL161772.1-201ENST00000610494 4412 ntBASIC16.31■□□□□ 0.2
VPS11Q9H270 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 AL109954.1-202ENST00000564051 2148 ntBASIC16.31■□□□□ 0.2
VPS11Q9H270 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS11Q9H270 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VPS11Q9H270 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS11Q9H270 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS11Q9H270 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS11Q9H270 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
VPS11Q9H270 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VPS11Q9H270 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 AC008677.1-201ENST00000519230 1561 ntBASIC16.3■□□□□ 0.2
VPS11Q9H270 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VPS11Q9H270 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS11Q9H270 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS11Q9H270 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 HNRNPDP1-201ENST00000439535 754 ntBASIC16.3■□□□□ 0.2
VPS11Q9H270 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS11Q9H270 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VPS11Q9H270 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS11Q9H270 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS11Q9H270 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.3■□□□□ 0.2
VPS11Q9H270 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS11Q9H270 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 OR7E47P-204ENST00000575924 449 ntBASIC16.3■□□□□ 0.2
VPS11Q9H270 MIR4515-201ENST00000584082 81 ntBASIC16.3■□□□□ 0.2
VPS11Q9H270 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS11Q9H270 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VPS11Q9H270 U82695.1-201ENST00000635752 1889 ntBASIC16.3■□□□□ 0.2
VPS11Q9H270 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS11Q9H270 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS11Q9H270 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VPS11Q9H270 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VPS11Q9H270 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
VPS11Q9H270 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS11Q9H270 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS11Q9H270 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS11Q9H270 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS11Q9H270 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VPS11Q9H270 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS11Q9H270 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 FAM197Y8-203ENST00000450145 560 ntBASIC16.29■□□□□ 0.2
VPS11Q9H270 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS11Q9H270 AC012640.2-201ENST00000561606 901 ntBASIC16.29■□□□□ 0.2
VPS11Q9H270 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 ACTL9-202ENST00000612068 1252 ntBASIC16.29■□□□□ 0.2
VPS11Q9H270 TP73-AS1-207ENST00000624167 988 ntBASIC16.29■□□□□ 0.2
VPS11Q9H270 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS11Q9H270 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms