Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 AC073439.1-201ENST00000624121 1774 ntBASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 AF186996.4-201ENST00000467186 377 ntBASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 UNC93B7-201ENST00000509439 705 ntBASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 WASH6P-202ENST00000359512 1437 ntBASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 AC090616.6-203ENST00000579186 1945 ntBASIC16.41■□□□□ 0.22
PHACTR1Q9C0D0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 IGLL3P-201ENST00000412472 434 ntBASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 GPX1P2-201ENST00000429271 606 ntBASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 RHOQP3-201ENST00000437982 621 ntBASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 VN2R19P-201ENST00000442399 1052 ntBASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 AC108751.1-201ENST00000490852 363 ntBASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 MIR4751-201ENST00000578027 74 ntBASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.4■□□□□ 0.22
PHACTR1Q9C0D0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
PHACTR1Q9C0D0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 FAM197Y8-203ENST00000450145 560 ntBASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms