Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 AL133267.1-201ENST00000398220 340 ntBASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 AC106872.11-201ENST00000605838 421 ntBASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20■□□□□ 0.79
CNTNAP4Q9C0A0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNTNAP4Q9C0A0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 IGHJ2P-201ENST00000454480 60 ntBASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP4Q9C0A0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 AHCYP2-201ENST00000430630 1300 ntBASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 ELK2AP-201ENST00000392510 1007 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms