Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 TSPY16P-201ENST00000449843 468 ntBASIC17.78■□□□□ 0.44
TRIM6Q9C030 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 HLA-V-204ENST00000476601 1289 ntBASIC17.78■□□□□ 0.44
TRIM6Q9C030 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM6Q9C030 U82695.1-201ENST00000635752 1889 ntBASIC17.78■□□□□ 0.44
TRIM6Q9C030 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM6Q9C030 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM6Q9C030 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM6Q9C030 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRIM6Q9C030 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.77■□□□□ 0.43
TRIM6Q9C030 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
TRIM6Q9C030 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM6Q9C030 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 AC106886.4-201ENST00000623557 2502 ntBASIC17.76■□□□□ 0.43
TRIM6Q9C030 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM6Q9C030 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM6Q9C030 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM6Q9C030 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM6Q9C030 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms