Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTPN18Q99952 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 PCDHB18P-201ENST00000524813 2368 ntBASIC18.23■□□□□ 0.51
PTPN18Q99952 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN18Q99952 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PTPN18Q99952 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTPN18Q99952 AL138709.1-201ENST00000614840 1693 ntBASIC18.23■□□□□ 0.51
PTPN18Q99952 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN18Q99952 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 FXNP2-201ENST00000411625 547 ntBASIC18.23■□□□□ 0.51
PTPN18Q99952 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
PTPN18Q99952 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN18Q99952 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN18Q99952 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN18Q99952 AC091804.1-201ENST00000486888 567 ntBASIC18.23■□□□□ 0.51
PTPN18Q99952 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.23■□□□□ 0.51
PTPN18Q99952 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN18Q99952 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PTPN18Q99952 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
PTPN18Q99952 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN18Q99952 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN18Q99952 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN18Q99952 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN18Q99952 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PTPN18Q99952 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PTPN18Q99952 AL662890.1-201ENST00000396818 632 ntBASIC18.22■□□□□ 0.51
PTPN18Q99952 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN18Q99952 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN18Q99952 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN18Q99952 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 HOMER2P2-201ENST00000451621 847 ntBASIC18.22■□□□□ 0.51
PTPN18Q99952 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PTPN18Q99952 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 HNRNPUP1-201ENST00000554987 333 ntBASIC18.22■□□□□ 0.51
PTPN18Q99952 CHMP4BP1-201ENST00000556017 588 ntBASIC18.22■□□□□ 0.51
PTPN18Q99952 MIR4722-201ENST00000578292 60 ntBASIC18.22■□□□□ 0.51
PTPN18Q99952 AC093813.1-201ENST00000605066 256 ntBASIC18.22■□□□□ 0.51
PTPN18Q99952 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 AC145423.3-201ENST00000615987 467 ntBASIC18.22■□□□□ 0.51
PTPN18Q99952 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPN18Q99952 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPN18Q99952 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN18Q99952 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN18Q99952 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN18Q99952 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN18Q99952 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN18Q99952 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN18Q99952 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN18Q99952 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.21■□□□□ 0.51
PTPN18Q99952 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.21■□□□□ 0.51
PTPN18Q99952 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms