Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 PRORSD1P-201ENST00000295112 541 ntBASIC10.76□□□□□ -0.69
LITAFQ99732 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.76□□□□□ -0.69
LITAFQ99732 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC10.76□□□□□ -0.69
LITAFQ99732 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.76□□□□□ -0.69
LITAFQ99732 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC10.76□□□□□ -0.69
LITAFQ99732 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC10.76□□□□□ -0.69
LITAFQ99732 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 LINC01023-201ENST00000606054 436 ntBASIC10.76□□□□□ -0.69
LITAFQ99732 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 AC023024.2-201ENST00000623561 1993 ntBASIC10.76□□□□□ -0.69
LITAFQ99732 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
LITAFQ99732 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 TP73-AS1-210ENST00000637775 1455 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
LITAFQ99732 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 DPM2-202ENST00000373110 738 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.75□□□□□ -0.69
LITAFQ99732 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.75□□□□□ -0.69
LITAFQ99732 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC10.75□□□□□ -0.69
LITAFQ99732 GCSHP5-201ENST00000443090 522 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 SLC25A3P1-201ENST00000443844 931 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 AL158047.1-201ENST00000445918 881 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC10.75□□□□□ -0.69
LITAFQ99732 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 CD99P1-205ENST00000527459 561 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 HYMAI.1-201ENST00000620949 238 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 AC011558.1-201ENST00000623459 338 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 INTS4P1-201ENST00000438455 1935 ntBASIC10.75□□□□□ -0.69
LITAFQ99732 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
LITAFQ99732 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms