Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.27■□□□□ 0.2
NDNQ99608 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 U82695.1-201ENST00000635752 1889 ntBASIC16.27■□□□□ 0.2
NDNQ99608 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NDNQ99608 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NDNQ99608 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.27■□□□□ 0.2
NDNQ99608 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.27■□□□□ 0.2
NDNQ99608 AC140658.5-201ENST00000438532 169 ntBASIC16.27■□□□□ 0.2
NDNQ99608 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.27■□□□□ 0.2
NDNQ99608 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.27■□□□□ 0.2
NDNQ99608 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.27■□□□□ 0.2
NDNQ99608 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.27■□□□□ 0.2
NDNQ99608 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.27■□□□□ 0.2
NDNQ99608 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.27■□□□□ 0.2
NDNQ99608 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.27■□□□□ 0.2
NDNQ99608 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NDNQ99608 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NDNQ99608 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDNQ99608 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.27■□□□□ 0.19
NDNQ99608 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NDNQ99608 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NDNQ99608 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NDNQ99608 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NDNQ99608 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDNQ99608 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.27■□□□□ 0.19
NDNQ99608 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NDNQ99608 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDNQ99608 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
NDNQ99608 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NDNQ99608 AC092474.2-201ENST00000424288 719 ntBASIC16.26■□□□□ 0.19
NDNQ99608 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.26■□□□□ 0.19
NDNQ99608 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.26■□□□□ 0.19
NDNQ99608 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NDNQ99608 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 AL078644.1-201ENST00000609881 752 ntBASIC16.26■□□□□ 0.19
NDNQ99608 AC120114.3-201ENST00000611923 658 ntBASIC16.26■□□□□ 0.19
NDNQ99608 AL513190.1-201ENST00000621254 727 ntBASIC16.26■□□□□ 0.19
NDNQ99608 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NDNQ99608 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.26■□□□□ 0.19
NDNQ99608 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NDNQ99608 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDNQ99608 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NDNQ99608 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.25■□□□□ 0.19
NDNQ99608 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDNQ99608 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms