Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 AC091812.2-201ENST00000619081 385 ntBASIC15.33■□□□□ 0.04
COL21A1Q96P44 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 NORAD-201ENST00000565493 5339 ntBASIC15.33■□□□□ 0.04
COL21A1Q96P44 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 AC092865.5-201ENST00000545435 363 ntBASIC15.32■□□□□ 0.04
COL21A1Q96P44 MIR3687-2-201ENST00000577708 61 ntBASIC15.32■□□□□ 0.04
COL21A1Q96P44 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 MIR3687-1-201ENST00000614492 61 ntBASIC15.32■□□□□ 0.04
COL21A1Q96P44 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.32■□□□□ 0.04
COL21A1Q96P44 AL161645.1-201ENST00000622716 1255 ntBASIC15.32■□□□□ 0.04
COL21A1Q96P44 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COL21A1Q96P44 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL21A1Q96P44 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 AL078644.1-201ENST00000609881 752 ntBASIC15.31■□□□□ 0.04
COL21A1Q96P44 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 AC005622.1-201ENST00000636801 1703 ntBASIC15.31■□□□□ 0.04
COL21A1Q96P44 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL21A1Q96P44 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
COL21A1Q96P44 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms