Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX27Q96L92 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.36■□□□□ 0.37
SNX27Q96L92 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.36■□□□□ 0.37
SNX27Q96L92 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX27Q96L92 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.36■□□□□ 0.37
SNX27Q96L92 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNX27Q96L92 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
SNX27Q96L92 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNX27Q96L92 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNX27Q96L92 KRT8P37-201ENST00000451609 1420 ntBASIC17.36■□□□□ 0.37
SNX27Q96L92 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNX27Q96L92 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
SNX27Q96L92 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX27Q96L92 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 AC008894.3-201ENST00000624324 3103 ntBASIC17.36■□□□□ 0.37
SNX27Q96L92 MTHFR-217ENST00000641820 1569 ntBASIC17.36■□□□□ 0.37
SNX27Q96L92 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SNX27Q96L92 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX27Q96L92 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX27Q96L92 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.35■□□□□ 0.37
SNX27Q96L92 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNX27Q96L92 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.35■□□□□ 0.37
SNX27Q96L92 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNX27Q96L92 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 AZGP1P1-201ENST00000411909 902 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX27Q96L92 SPDYE18-201ENST00000510091 1050 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 SDHAP3-202ENST00000515467 728 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.35■□□□□ 0.37
SNX27Q96L92 AC025048.3-201ENST00000590609 569 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.35■□□□□ 0.37
SNX27Q96L92 AC004790.1-201ENST00000612686 536 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 AC005702.4-201ENST00000618393 416 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 AL109936.8-201ENST00000641772 604 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX27Q96L92 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.35■□□□□ 0.37
SNX27Q96L92 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX27Q96L92 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX27Q96L92 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX27Q96L92 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX27Q96L92 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SNX27Q96L92 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.34■□□□□ 0.37
SNX27Q96L92 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.34■□□□□ 0.37
SNX27Q96L92 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX27Q96L92 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.34■□□□□ 0.37
SNX27Q96L92 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX27Q96L92 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.34■□□□□ 0.37
SNX27Q96L92 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.34■□□□□ 0.37
SNX27Q96L92 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNX27Q96L92 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNX27Q96L92 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
SNX27Q96L92 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.34■□□□□ 0.37
SNX27Q96L92 AL662844.4-201ENST00000606367 2838 ntBASIC17.34■□□□□ 0.37
SNX27Q96L92 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNX27Q96L92 MIR6805-201ENST00000615055 62 ntBASIC17.34■□□□□ 0.37
SNX27Q96L92 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNX27Q96L92 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX27Q96L92 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.34■□□□□ 0.37
SNX27Q96L92 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX27Q96L92 PKD1P1-201ENST00000458669 6805 ntBASIC17.34■□□□□ 0.37
SNX27Q96L92 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms