Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 POU5F1P6-201ENST00000466990 990 ntBASIC16.71■□□□□ 0.27
IFT43Q96FT9 RN7SL589P-201ENST00000481268 310 ntBASIC16.71■□□□□ 0.27
IFT43Q96FT9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 AC025678.2-201ENST00000562061 970 ntBASIC16.71■□□□□ 0.27
IFT43Q96FT9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
IFT43Q96FT9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
IFT43Q96FT9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
IFT43Q96FT9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 AC016027.1-202ENST00000607927 1699 ntBASIC16.7■□□□□ 0.26
IFT43Q96FT9 AL139400.1-201ENST00000366220 510 ntBASIC16.7■□□□□ 0.26
IFT43Q96FT9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 AL671277.1-201ENST00000429656 993 ntBASIC16.7■□□□□ 0.26
IFT43Q96FT9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 AC004449.1-201ENST00000564240 433 ntBASIC16.7■□□□□ 0.26
IFT43Q96FT9 AC099522.2-201ENST00000607001 744 ntBASIC16.7■□□□□ 0.26
IFT43Q96FT9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
IFT43Q96FT9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFT43Q96FT9 AKAP8P1-201ENST00000434743 1349 ntBASIC16.7■□□□□ 0.26
IFT43Q96FT9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.69■□□□□ 0.26
IFT43Q96FT9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms