Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 AKR1C7P-201ENST00000305623 895 ntBASIC14.13□□□□□ -0.15
CPNE2Q96FN4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.13□□□□□ -0.15
CPNE2Q96FN4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 RPS2P1-201ENST00000434010 821 ntBASIC14.13□□□□□ -0.15
CPNE2Q96FN4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 AL592424.1-201ENST00000563624 1536 ntBASIC14.13□□□□□ -0.15
CPNE2Q96FN4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.12□□□□□ -0.15
CPNE2Q96FN4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 AF238378.1-201ENST00000526806 358 ntBASIC14.12□□□□□ -0.15
CPNE2Q96FN4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms