Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 INTS4P1-201ENST00000438455 1935 ntBASIC12.38□□□□□ -0.43
SMIM12Q96EX1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 TP73-AS1-210ENST00000637775 1455 ntBASIC12.38□□□□□ -0.43
SMIM12Q96EX1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM12Q96EX1 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 HYMAI.1-201ENST00000620949 238 ntBASIC12.37□□□□□ -0.43
SMIM12Q96EX1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.37□□□□□ -0.43
SMIM12Q96EX1 AC005089.1-201ENST00000619486 2241 ntBASIC12.37□□□□□ -0.43
SMIM12Q96EX1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM12Q96EX1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 SNX18-202ENST00000343017 3140 ntBASIC12.36□□□□□ -0.43
SMIM12Q96EX1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM12Q96EX1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms