Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SCG3Q8WXD2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 LINC01144-201ENST00000626198 1710 ntBASIC16.62■□□□□ 0.25
SCG3Q8WXD2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 MIR4515-201ENST00000584082 81 ntBASIC16.62■□□□□ 0.25
SCG3Q8WXD2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.62■□□□□ 0.25
SCG3Q8WXD2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 GGT4P-201ENST00000623672 1708 ntBASIC16.62■□□□□ 0.25
SCG3Q8WXD2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SCG3Q8WXD2 AL031731.1-201ENST00000642131 2094 ntBASIC16.61■□□□□ 0.25
SCG3Q8WXD2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.61■□□□□ 0.25
SCG3Q8WXD2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 AC004449.1-201ENST00000564240 433 ntBASIC16.61■□□□□ 0.25
SCG3Q8WXD2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 AL513210.1-201ENST00000629608 234 ntBASIC16.61■□□□□ 0.25
SCG3Q8WXD2 AC105339.1-204ENST00000636249 355 ntBASIC16.61■□□□□ 0.25
SCG3Q8WXD2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCG3Q8WXD2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms