Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 AC069148.1-201ENST00000608741 768 ntBASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IL1Q8TBN0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 SLC25A6P2-201ENST00000497974 877 ntBASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 AC107918.2-201ENST00000530817 355 ntBASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 AL109954.1-202ENST00000564051 2148 ntBASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IL1Q8TBN0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 HCG4P8-203ENST00000443049 980 ntBASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 AC106795.1-205ENST00000512851 1056 ntBASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 AC012615.1-201ENST00000565797 1299 ntBASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 AP001269.4-201ENST00000609611 512 ntBASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IL1Q8TBN0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms