Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PCGF3-213ENST00000620529 1899 ntBASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHKBP1Q8TBC3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 AC103702.1-201ENST00000548801 2630 ntBASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 SPDYE19P-201ENST00000338590 713 ntBASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 AC114501.2-201ENST00000439631 535 ntBASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 DOC2GP-202ENST00000514950 1163 ntBASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SHKBP1Q8TBC3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 DGCR5-201ENST00000399539 862 ntBASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 PAUPAR-201ENST00000630360 2965 ntBASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 AC138969.3-201ENST00000546612 1459 ntBASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 AC138932.2-201ENST00000548268 1459 ntBASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 AC126755.4-201ENST00000549796 1459 ntBASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
SHKBP1Q8TBC3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 OR8S1-201ENST00000310194 1080 ntBASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms