Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH19Q8TAB3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 AC093520.2-201ENST00000561830 333 ntBASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 AL691432.1-201ENST00000596308 1422 ntBASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 AC027612.4-201ENST00000605371 583 ntBASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 AP3S2-216ENST00000617003 1561 ntBASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH19Q8TAB3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 HLA-H-201ENST00000383620 1096 ntBASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 AC004461.1-201ENST00000412461 403 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms