Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIPK4Q8NE63 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 CICP4-201ENST00000447359 2812 ntBASIC15.78■□□□□ 0.12
HIPK4Q8NE63 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 AL590787.1-201ENST00000568856 1315 ntBASIC15.78■□□□□ 0.12
HIPK4Q8NE63 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 NUS1P2-201ENST00000417358 873 ntBASIC15.78■□□□□ 0.12
HIPK4Q8NE63 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 TERC-201ENST00000602385 541 ntBASIC15.78■□□□□ 0.12
HIPK4Q8NE63 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 AL353135.1-201ENST00000606729 504 ntBASIC15.78■□□□□ 0.12
HIPK4Q8NE63 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 AP000550.4-202ENST00000639755 178 ntBASIC15.78■□□□□ 0.12
HIPK4Q8NE63 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 AC016027.1-202ENST00000607927 1699 ntBASIC15.78■□□□□ 0.12
HIPK4Q8NE63 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HIPK4Q8NE63 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 PRYP5-201ENST00000451909 266 ntBASIC15.77■□□□□ 0.12
HIPK4Q8NE63 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 AL591684.3-201ENST00000605187 298 ntBASIC15.77■□□□□ 0.12
HIPK4Q8NE63 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 AC069148.1-201ENST00000608741 768 ntBASIC15.77■□□□□ 0.12
HIPK4Q8NE63 NPAP1P7-201ENST00000613027 823 ntBASIC15.77■□□□□ 0.12
HIPK4Q8NE63 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.77■□□□□ 0.12
HIPK4Q8NE63 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIPK4Q8NE63 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms