Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 NUS1P2-201ENST00000417358 873 ntBASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 AC104819.1-201ENST00000504587 486 ntBASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 AP001269.4-201ENST00000609611 512 ntBASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 AC005622.1-201ENST00000636801 1703 ntBASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 AL109954.1-202ENST00000564051 2148 ntBASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 CICP13-201ENST00000422015 2789 ntBASIC16.49■□□□□ 0.23
SRRM1Q8IYB3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AL353732.1-201ENST00000569618 1459 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AL161772.1-201ENST00000610494 4412 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 PI4KAP1-204ENST00000612579 1703 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 SLC25A6P2-201ENST00000497974 877 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 KRT18P31-201ENST00000506277 1292 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AC087641.1-201ENST00000557561 1021 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AC099336.1-202ENST00000602961 463 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AL121912.1-201ENST00000603683 238 ntBASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SRRM1Q8IYB3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms