Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AL109954.1-202ENST00000564051 2148 ntBASIC16.21■□□□□ 0.18
TRIM42Q8IWZ5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.21■□□□□ 0.18
TRIM42Q8IWZ5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TRIM42Q8IWZ5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
TRIM42Q8IWZ5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 CICP13-201ENST00000422015 2789 ntBASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 AC136621.1-201ENST00000624017 2304 ntBASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM42Q8IWZ5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AC087481.3-201ENST00000602886 1894 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 KRT18P31-201ENST00000506277 1292 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AC139887.3-201ENST00000568585 713 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 LINC01711-201ENST00000598340 967 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AL591684.3-201ENST00000605187 298 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AL732292.2-201ENST00000609649 430 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AL691432.3-201ENST00000621860 400 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 AL139288.1-201ENST00000623748 933 ntBASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms