Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AC105250.1-201ENST00000509378 2057 ntBASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 RNU1-129P-201ENST00000384064 167 ntBASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 U1.21-201ENST00000580816 167 ntBASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AL358472.4-201ENST00000633140 710 ntBASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AC090616.6-203ENST00000579186 1945 ntBASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM1Q86UE6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 CICP24-201ENST00000605464 2705 ntBASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 AC093724.1-201ENST00000448659 1027 ntBASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 MIR4515-201ENST00000584082 81 ntBASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRTM1Q86UE6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms