Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.68□□□□□ -0.06
SHFQ7M4L6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 AC023157.3-201ENST00000619086 2088 ntBASIC14.67□□□□□ -0.06
SHFQ7M4L6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.67□□□□□ -0.06
SHFQ7M4L6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 AC073621.1-201ENST00000392730 636 ntBASIC14.67□□□□□ -0.06
SHFQ7M4L6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHFQ7M4L6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SHFQ7M4L6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 AC092919.2-201ENST00000623631 1645 ntBASIC14.66□□□□□ -0.06
SHFQ7M4L6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHFQ7M4L6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.66□□□□□ -0.06
SHFQ7M4L6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms