Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 AC025580.3-201ENST00000617932 1424 ntBASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST3H2AQ7L7L0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 MIR648-201ENST00000385046 94 ntBASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 AC109635.5-201ENST00000533593 962 ntBASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 AC145285.3-201ENST00000564603 959 ntBASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 AC064836.3-201ENST00000607928 673 ntBASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST3H2AQ7L7L0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AC092474.2-201ENST00000424288 719 ntBASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2AQ7L7L0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms