Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRIP1LQ68CZ1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 AC106760.1-201ENST00000508690 800 ntBASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 KRT90P-201ENST00000549264 1064 ntBASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 HADH-212ENST00000638621 741 ntTSL 5 BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRIP1LQ68CZ1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
RPGRIP1LQ68CZ1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC22.52■■□□□ 1.19
RPGRIP1LQ68CZ1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 FLJ38576-201ENST00000623820 2459 ntBASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 FAM21FP-201ENST00000426241 1131 ntBASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPGRIP1LQ68CZ1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 ZBTB12BP-201ENST00000314232 1122 ntBASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 EHF-205ENST00000527935 557 ntTSL 2 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPGRIP1LQ68CZ1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 AGGF1P2-201ENST00000426656 2106 ntBASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 FAM8A2P-201ENST00000528813 1142 ntBASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC22.49■■□□□ 1.19
RPGRIP1LQ68CZ1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms