Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 AC092474.2-201ENST00000424288 719 ntBASIC15.77■□□□□ 0.12
SGO1Q5FBB7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 AC145285.3-201ENST00000564603 959 ntBASIC15.77■□□□□ 0.12
SGO1Q5FBB7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SGO1Q5FBB7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 AC112504.1-201ENST00000623415 1841 ntBASIC15.77■□□□□ 0.11
SGO1Q5FBB7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SGO1Q5FBB7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 AL365209.1-201ENST00000624418 6473 ntBASIC15.76■□□□□ 0.11
SGO1Q5FBB7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.76■□□□□ 0.11
SGO1Q5FBB7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.76■□□□□ 0.11
SGO1Q5FBB7 AL078644.1-201ENST00000609881 752 ntBASIC15.76■□□□□ 0.11
SGO1Q5FBB7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms