Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USH1GQ495M9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USH1GQ495M9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.49■□□□□ 0.55
USH1GQ495M9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.49■□□□□ 0.55
USH1GQ495M9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.49■□□□□ 0.55
USH1GQ495M9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
USH1GQ495M9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.49■□□□□ 0.55
USH1GQ495M9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USH1GQ495M9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
USH1GQ495M9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.48■□□□□ 0.55
USH1GQ495M9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
USH1GQ495M9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
USH1GQ495M9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
USH1GQ495M9 BTBD7P1-201ENST00000447253 1453 ntBASIC18.48■□□□□ 0.55
USH1GQ495M9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
USH1GQ495M9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
USH1GQ495M9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
USH1GQ495M9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.48■□□□□ 0.55
USH1GQ495M9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.48■□□□□ 0.55
USH1GQ495M9 HIST3H2BA-201ENST00000436555 524 ntBASIC18.48■□□□□ 0.55
USH1GQ495M9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.48■□□□□ 0.55
USH1GQ495M9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.48■□□□□ 0.55
USH1GQ495M9 AC245100.5-201ENST00000452108 331 ntBASIC18.48■□□□□ 0.55
USH1GQ495M9 AL132655.2-201ENST00000596276 594 ntBASIC18.48■□□□□ 0.55
USH1GQ495M9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
USH1GQ495M9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
USH1GQ495M9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USH1GQ495M9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.47■□□□□ 0.55
USH1GQ495M9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.47■□□□□ 0.55
USH1GQ495M9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.47■□□□□ 0.55
USH1GQ495M9 AC007541.1-201ENST00000570282 1469 ntBASIC18.47■□□□□ 0.55
USH1GQ495M9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.47■□□□□ 0.55
USH1GQ495M9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.47■□□□□ 0.55
USH1GQ495M9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.47■□□□□ 0.55
USH1GQ495M9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.47■□□□□ 0.55
USH1GQ495M9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.47■□□□□ 0.55
USH1GQ495M9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.47■□□□□ 0.55
USH1GQ495M9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 AC243562.2-201ENST00000561247 970 ntBASIC18.47■□□□□ 0.55
USH1GQ495M9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.47■□□□□ 0.55
USH1GQ495M9 AC004461.2-201ENST00000629517 803 ntBASIC18.47■□□□□ 0.55
USH1GQ495M9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.47■□□□□ 0.55
USH1GQ495M9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.47■□□□□ 0.55
USH1GQ495M9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
USH1GQ495M9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.47■□□□□ 0.55
USH1GQ495M9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
USH1GQ495M9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 AC134407.2-201ENST00000625089 1978 ntBASIC18.46■□□□□ 0.55
USH1GQ495M9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
USH1GQ495M9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
USH1GQ495M9 SPDYE19P-201ENST00000338590 713 ntBASIC18.46■□□□□ 0.55
USH1GQ495M9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
USH1GQ495M9 AC004987.2-201ENST00000395959 1148 ntBASIC18.46■□□□□ 0.55
USH1GQ495M9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.46■□□□□ 0.55
USH1GQ495M9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.46■□□□□ 0.55
USH1GQ495M9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.46■□□□□ 0.55
USH1GQ495M9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.46■□□□□ 0.55
USH1GQ495M9 SDHAP3-202ENST00000515467 728 ntBASIC18.46■□□□□ 0.55
USH1GQ495M9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms