Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SSBP1Q04837 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.71□□□□□ -0.22
SSBP1Q04837 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SSBP1Q04837 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSBP1Q04837 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP1Q04837 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SSBP1Q04837 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SSBP1Q04837 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.7□□□□□ -0.22
SSBP1Q04837 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP1Q04837 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP1Q04837 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP1Q04837 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP1Q04837 AL139288.1-201ENST00000623748 933 ntBASIC13.7□□□□□ -0.22
SSBP1Q04837 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP1Q04837 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSBP1Q04837 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSBP1Q04837 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP1Q04837 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 AL359258.3-201ENST00000622910 2331 ntBASIC13.69□□□□□ -0.22
SSBP1Q04837 KRT18P1-202ENST00000452408 1331 ntBASIC13.69□□□□□ -0.22
SSBP1Q04837 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP1Q04837 BX005266.1-201ENST00000473402 457 ntBASIC13.69□□□□□ -0.22
SSBP1Q04837 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 AC139887.3-201ENST00000568585 713 ntBASIC13.69□□□□□ -0.22
SSBP1Q04837 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.69□□□□□ -0.22
SSBP1Q04837 AC091076.1-201ENST00000610741 619 ntBASIC13.69□□□□□ -0.22
SSBP1Q04837 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 FGD5P1-202ENST00000614866 2498 ntBASIC13.69□□□□□ -0.22
SSBP1Q04837 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSBP1Q04837 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP1Q04837 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP1Q04837 SNX18-202ENST00000343017 3140 ntBASIC13.68□□□□□ -0.22
SSBP1Q04837 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms