Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK5Q00535 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 AC018712.1-201ENST00000455767 687 ntBASIC14.59□□□□□ -0.07
CDK5Q00535 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK5Q00535 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK5Q00535 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDK5Q00535 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.59□□□□□ -0.07
CDK5Q00535 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CDK5Q00535 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDK5Q00535 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 AC092127.1-201ENST00000567093 3455 ntBASIC14.59□□□□□ -0.07
CDK5Q00535 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK5Q00535 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK5Q00535 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK5Q00535 TCAF2P1-201ENST00000291129 2421 ntBASIC14.58□□□□□ -0.07
CDK5Q00535 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDK5Q00535 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDK5Q00535 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDK5Q00535 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDK5Q00535 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDK5Q00535 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK5Q00535 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK5Q00535 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDK5Q00535 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK5Q00535 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK5Q00535 AC092474.2-201ENST00000424288 719 ntBASIC14.58□□□□□ -0.08
CDK5Q00535 GPX1P2-201ENST00000429271 606 ntBASIC14.58□□□□□ -0.08
CDK5Q00535 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDK5Q00535 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK5Q00535 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK5Q00535 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK5Q00535 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK5Q00535 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK5Q00535 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDK5Q00535 AL009183.1-201ENST00000603760 355 ntBASIC14.58□□□□□ -0.08
CDK5Q00535 AL078644.1-201ENST00000609881 752 ntBASIC14.58□□□□□ -0.08
CDK5Q00535 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK5Q00535 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK5Q00535 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK5Q00535 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDK5Q00535 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 AC134407.2-201ENST00000625089 1978 ntBASIC14.58□□□□□ -0.08
CDK5Q00535 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDK5Q00535 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CDK5Q00535 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK5Q00535 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDK5Q00535 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK5Q00535 AC073439.1-201ENST00000624121 1774 ntBASIC14.57□□□□□ -0.08
CDK5Q00535 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK5Q00535 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK5Q00535 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDK5Q00535 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDK5Q00535 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK5Q00535 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CDK5Q00535 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
CDK5Q00535 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms