Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC9.74□□□□□ -0.85
HSPG2P98160 TMCO5B-205ENST00000530020 894 ntBASIC9.74□□□□□ -0.85
HSPG2P98160 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC9.74□□□□□ -0.85
HSPG2P98160 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC9.74□□□□□ -0.85
HSPG2P98160 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
HSPG2P98160 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 AC007787.1-201ENST00000588095 1583 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
HSPG2P98160 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC9.73□□□□□ -0.85
HSPG2P98160 NSD1-211ENST00000511258 809 ntTSL 3 BASIC9.73□□□□□ -0.85
HSPG2P98160 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
HSPG2P98160 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 AC020922.3-201ENST00000595064 547 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC9.73□□□□□ -0.85
HSPG2P98160 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
HSPG2P98160 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC9.73□□□□□ -0.85
HSPG2P98160 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
HSPG2P98160 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC9.73□□□□□ -0.85
HSPG2P98160 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC9.73□□□□□ -0.85
HSPG2P98160 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC9.73□□□□□ -0.85
HSPG2P98160 HKR1-225ENST00000592168 566 ntTSL 4 BASIC9.73□□□□□ -0.85
HSPG2P98160 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 AC148477.4-201ENST00000613430 1793 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 AC018892.3-201ENST00000623986 2499 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 HLA-A-202ENST00000376806 1854 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
HSPG2P98160 NPPA-201ENST00000376476 728 ntTSL 3 BASIC9.73□□□□□ -0.85
HSPG2P98160 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 AC104073.2-201ENST00000453737 312 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 SCARNA21-201ENST00000517026 139 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 RTN3P1-201ENST00000536295 711 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC9.73□□□□□ -0.85
HSPG2P98160 PCBP2-OT1-201ENST00000634357 590 ntBASIC9.73□□□□□ -0.85
HSPG2P98160 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
HSPG2P98160 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
HSPG2P98160 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
HSPG2P98160 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC9.72□□□□□ -0.85
HSPG2P98160 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC9.72□□□□□ -0.85
HSPG2P98160 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC103691.2-201ENST00000618824 433 ntBASIC9.72□□□□□ -0.85
HSPG2P98160 MME-218ENST00000625667 363 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC9.72□□□□□ -0.85
HSPG2P98160 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HSPG2P98160 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC9.72□□□□□ -0.85
HSPG2P98160 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms