Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
IRX3P78415 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.82■□□□□ 0.6
IRX3P78415 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.82■□□□□ 0.6
IRX3P78415 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 AC080080.1-201ENST00000625121 2420 ntBASIC18.82■□□□□ 0.6
IRX3P78415 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 CROCCP1-201ENST00000426910 5675 ntBASIC18.82■□□□□ 0.6
IRX3P78415 AL645728.1-201ENST00000366221 2101 ntBASIC18.82■□□□□ 0.6
IRX3P78415 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
IRX3P78415 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX3P78415 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.81■□□□□ 0.6
IRX3P78415 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
IRX3P78415 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.81■□□□□ 0.6
IRX3P78415 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.81■□□□□ 0.6
IRX3P78415 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.81■□□□□ 0.6
IRX3P78415 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
IRX3P78415 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.81■□□□□ 0.6
IRX3P78415 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 MYCLP2-201ENST00000449268 967 ntBASIC18.81■□□□□ 0.6
IRX3P78415 ACA64.2-201ENST00000459014 129 ntBASIC18.81■□□□□ 0.6
IRX3P78415 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.81■□□□□ 0.6
IRX3P78415 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.81■□□□□ 0.6
IRX3P78415 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.81■□□□□ 0.6
IRX3P78415 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.81■□□□□ 0.6
IRX3P78415 PKD1P5-201ENST00000532415 10291 ntBASIC18.81■□□□□ 0.6
IRX3P78415 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 AL031731.1-201ENST00000642131 2094 ntBASIC18.81■□□□□ 0.6
IRX3P78415 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.81■□□□□ 0.6
IRX3P78415 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.81■□□□□ 0.6
IRX3P78415 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX3P78415 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
IRX3P78415 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
IRX3P78415 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
IRX3P78415 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.8■□□□□ 0.6
IRX3P78415 AC023310.3-201ENST00000557027 670 ntBASIC18.8■□□□□ 0.6
IRX3P78415 AC100756.1-201ENST00000562736 682 ntBASIC18.8■□□□□ 0.6
IRX3P78415 AC138749.3-201ENST00000567691 622 ntBASIC18.8■□□□□ 0.6
IRX3P78415 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.8■□□□□ 0.6
IRX3P78415 AC116165.1-201ENST00000611806 668 ntBASIC18.8■□□□□ 0.6
IRX3P78415 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.8■□□□□ 0.6
IRX3P78415 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.8■□□□□ 0.6
IRX3P78415 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.8■□□□□ 0.6
IRX3P78415 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
IRX3P78415 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
IRX3P78415 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX3P78415 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.79■□□□□ 0.6
IRX3P78415 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX3P78415 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX3P78415 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
IRX3P78415 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX3P78415 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms