Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP98P52948 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP98P52948 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP98P52948 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP98P52948 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP98P52948 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP98P52948 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP98P52948 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NUP98P52948 FZD10-202ENST00000539839 3282 ntBASIC19.75■□□□□ 0.75
NUP98P52948 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP98P52948 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NUP98P52948 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.74■□□□□ 0.75
NUP98P52948 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP98P52948 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NUP98P52948 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.74■□□□□ 0.75
NUP98P52948 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP98P52948 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP98P52948 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.74■□□□□ 0.75
NUP98P52948 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
NUP98P52948 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NUP98P52948 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NUP98P52948 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.74■□□□□ 0.75
NUP98P52948 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NUP98P52948 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.74■□□□□ 0.75
NUP98P52948 AC079316.1-201ENST00000548397 411 ntBASIC19.74■□□□□ 0.75
NUP98P52948 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NUP98P52948 AC025279.2-201ENST00000569730 653 ntBASIC19.74■□□□□ 0.75
NUP98P52948 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP98P52948 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP98P52948 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.74■□□□□ 0.75
NUP98P52948 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP98P52948 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.73■□□□□ 0.75
NUP98P52948 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP98P52948 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUP98P52948 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.73■□□□□ 0.75
NUP98P52948 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP98P52948 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.73■□□□□ 0.75
NUP98P52948 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NUP98P52948 AC022188.1-201ENST00000620960 1664 ntBASIC19.73■□□□□ 0.75
NUP98P52948 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NUP98P52948 AC026954.1-201ENST00000429771 1293 ntBASIC19.73■□□□□ 0.75
NUP98P52948 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.73■□□□□ 0.75
NUP98P52948 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUP98P52948 AP001063.1-201ENST00000568332 529 ntBASIC19.73■□□□□ 0.75
NUP98P52948 RN7SL560P-201ENST00000577943 264 ntBASIC19.73■□□□□ 0.75
NUP98P52948 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.73■□□□□ 0.75
NUP98P52948 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NUP98P52948 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.73■□□□□ 0.75
NUP98P52948 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP98P52948 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP98P52948 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.73■□□□□ 0.75
NUP98P52948 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.72■□□□□ 0.75
NUP98P52948 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NUP98P52948 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.72■□□□□ 0.75
NUP98P52948 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NUP98P52948 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.72■□□□□ 0.75
NUP98P52948 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.72■□□□□ 0.75
NUP98P52948 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NUP98P52948 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NUP98P52948 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUP98P52948 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms