Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ZNF140P52738 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF140P52738 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.02■□□□□ 0.16
ZNF140P52738 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ZNF140P52738 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF140P52738 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF140P52738 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 SPDYE7P-202ENST00000420373 878 ntBASIC16.02■□□□□ 0.16
ZNF140P52738 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.02■□□□□ 0.16
ZNF140P52738 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF140P52738 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF140P52738 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF140P52738 AC069262.1-201ENST00000539058 672 ntBASIC16.02■□□□□ 0.16
ZNF140P52738 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ZNF140P52738 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF140P52738 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF140P52738 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF140P52738 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF140P52738 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF140P52738 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF140P52738 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF140P52738 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF140P52738 AC018892.3-201ENST00000623986 2499 ntBASIC16.02■□□□□ 0.15
ZNF140P52738 KRT8P37-201ENST00000451609 1420 ntBASIC16.02■□□□□ 0.15
ZNF140P52738 CROCCP1-201ENST00000426910 5675 ntBASIC16.01■□□□□ 0.15
ZNF140P52738 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF140P52738 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF140P52738 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 AC132872.4-202ENST00000622924 2756 ntBASIC16.01■□□□□ 0.15
ZNF140P52738 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF140P52738 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF140P52738 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF140P52738 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF140P52738 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF140P52738 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF140P52738 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF140P52738 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF140P52738 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ZNF140P52738 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF140P52738 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF140P52738 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF140P52738 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ZNF140P52738 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 AL035456.1-201ENST00000456064 1369 ntBASIC16■□□□□ 0.15
ZNF140P52738 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ZNF140P52738 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
ZNF140P52738 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 AC105917.1-201ENST00000506637 2539 ntBASIC16■□□□□ 0.15
ZNF140P52738 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16■□□□□ 0.15
ZNF140P52738 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
ZNF140P52738 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16■□□□□ 0.15
ZNF140P52738 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16■□□□□ 0.15
ZNF140P52738 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16■□□□□ 0.15
ZNF140P52738 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16■□□□□ 0.15
ZNF140P52738 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16■□□□□ 0.15
ZNF140P52738 RN7SL828P-201ENST00000607615 303 ntBASIC16■□□□□ 0.15
ZNF140P52738 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms