Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF890P-202ENST00000530367 1156 ntBASIC18.19■□□□□ 0.5
USP11P51784 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.19■□□□□ 0.5
USP11P51784 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.19■□□□□ 0.5
USP11P51784 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.19■□□□□ 0.5
USP11P51784 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.19■□□□□ 0.5
USP11P51784 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.19■□□□□ 0.5
USP11P51784 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
USP11P51784 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.19■□□□□ 0.5
USP11P51784 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.19■□□□□ 0.5
USP11P51784 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.18■□□□□ 0.5
USP11P51784 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
USP11P51784 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP11P51784 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.18■□□□□ 0.5
USP11P51784 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.18■□□□□ 0.5
USP11P51784 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.18■□□□□ 0.5
USP11P51784 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.18■□□□□ 0.5
USP11P51784 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.18■□□□□ 0.5
USP11P51784 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.18■□□□□ 0.5
USP11P51784 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.18■□□□□ 0.5
USP11P51784 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 AL844908.2-201ENST00000609461 460 ntBASIC18.18■□□□□ 0.5
USP11P51784 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.18■□□□□ 0.5
USP11P51784 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USP11P51784 REXO1L1P-202ENST00000608646 1974 ntBASIC18.18■□□□□ 0.5
USP11P51784 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP11P51784 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 AC046158.3-201ENST00000624947 2558 ntBASIC18.18■□□□□ 0.5
USP11P51784 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.18■□□□□ 0.5
USP11P51784 AC024909.3-201ENST00000611513 2257 ntBASIC18.18■□□□□ 0.5
USP11P51784 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP11P51784 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.17■□□□□ 0.5
USP11P51784 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
USP11P51784 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.17■□□□□ 0.5
USP11P51784 AC009477.1-201ENST00000452936 217 ntBASIC18.17■□□□□ 0.5
USP11P51784 PHKG1P2-201ENST00000457537 863 ntBASIC18.17■□□□□ 0.5
USP11P51784 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 AL512361.1-201ENST00000554200 418 ntBASIC18.17■□□□□ 0.5
USP11P51784 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
USP11P51784 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP11P51784 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.17■□□□□ 0.5
USP11P51784 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
USP11P51784 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP11P51784 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms