Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 LINC02447-202ENST00000501888 2146 ntBASIC14.16□□□□□ -0.14
GSK3AP49840 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.16□□□□□ -0.14
GSK3AP49840 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 AC120114.3-201ENST00000611923 658 ntBASIC14.16□□□□□ -0.14
GSK3AP49840 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GSK3AP49840 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
GSK3AP49840 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GSK3AP49840 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.15□□□□□ -0.14
GSK3AP49840 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 AC092919.2-201ENST00000623631 1645 ntBASIC14.15□□□□□ -0.14
GSK3AP49840 AC099063.4-201ENST00000641099 1602 ntBASIC14.15□□□□□ -0.14
GSK3AP49840 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
GSK3AP49840 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.15□□□□□ -0.14
GSK3AP49840 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.15□□□□□ -0.14
GSK3AP49840 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.15□□□□□ -0.14
GSK3AP49840 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.15□□□□□ -0.14
GSK3AP49840 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 RNA5SP416-201ENST00000516838 111 ntBASIC14.15□□□□□ -0.14
GSK3AP49840 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 SLC25A1P1-201ENST00000528351 927 ntBASIC14.15□□□□□ -0.14
GSK3AP49840 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.15□□□□□ -0.14
GSK3AP49840 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.15□□□□□ -0.14
GSK3AP49840 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.15□□□□□ -0.14
GSK3AP49840 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GSK3AP49840 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.15□□□□□ -0.14
GSK3AP49840 AL078644.1-201ENST00000609881 752 ntBASIC14.15□□□□□ -0.14
GSK3AP49840 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GSK3AP49840 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GSK3AP49840 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
GSK3AP49840 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.15□□□□□ -0.15
GSK3AP49840 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.15□□□□□ -0.15
GSK3AP49840 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GSK3AP49840 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GSK3AP49840 AC016027.1-202ENST00000607927 1699 ntBASIC14.14□□□□□ -0.15
GSK3AP49840 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GSK3AP49840 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms