Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 AC114501.2-201ENST00000439631 535 ntBASIC17.04■□□□□ 0.32
LHX1P48742 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.04■□□□□ 0.32
LHX1P48742 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LHX1P48742 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.04■□□□□ 0.32
LHX1P48742 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LHX1P48742 AC004840.1-201ENST00000636359 365 ntBASIC17.04■□□□□ 0.32
LHX1P48742 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 AC006449.5-201ENST00000610658 2098 ntBASIC17.04■□□□□ 0.32
LHX1P48742 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
LHX1P48742 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX1P48742 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.03■□□□□ 0.32
LHX1P48742 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.03■□□□□ 0.32
LHX1P48742 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LHX1P48742 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX1P48742 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LHX1P48742 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX1P48742 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX1P48742 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX1P48742 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LHX1P48742 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX1P48742 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX1P48742 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX1P48742 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LHX1P48742 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 SPTLC1P1-201ENST00000447199 261 ntBASIC17.02■□□□□ 0.32
LHX1P48742 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.02■□□□□ 0.32
LHX1P48742 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX1P48742 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.02■□□□□ 0.32
LHX1P48742 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LHX1P48742 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX1P48742 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.02■□□□□ 0.32
LHX1P48742 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 AC025048.3-201ENST00000590609 569 ntBASIC17.02■□□□□ 0.32
LHX1P48742 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.02■□□□□ 0.32
LHX1P48742 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.02■□□□□ 0.32
LHX1P48742 AC005702.4-201ENST00000618393 416 ntBASIC17.02■□□□□ 0.32
LHX1P48742 AL109936.8-201ENST00000641772 604 ntBASIC17.02■□□□□ 0.32
LHX1P48742 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX1P48742 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX1P48742 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX1P48742 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
LHX1P48742 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.02■□□□□ 0.31
LHX1P48742 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.02■□□□□ 0.31
LHX1P48742 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LHX1P48742 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX1P48742 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms