Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 AC022144.1-201ENST00000602255 1580 ntBASIC14.83□□□□□ -0.04
RFC3P40938 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RFC3P40938 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.83□□□□□ -0.04
RFC3P40938 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.83□□□□□ -0.04
RFC3P40938 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RFC3P40938 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 HLA-V-204ENST00000476601 1289 ntBASIC14.83□□□□□ -0.04
RFC3P40938 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RFC3P40938 TEX28P1-201ENST00000613479 1221 ntBASIC14.83□□□□□ -0.04
RFC3P40938 TEX28P2-201ENST00000617764 1221 ntBASIC14.83□□□□□ -0.04
RFC3P40938 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.83□□□□□ -0.04
RFC3P40938 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.83□□□□□ -0.04
RFC3P40938 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.83□□□□□ -0.04
RFC3P40938 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.83□□□□□ -0.04
RFC3P40938 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.83□□□□□ -0.04
RFC3P40938 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RFC3P40938 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.83□□□□□ -0.04
RFC3P40938 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 AL035456.1-201ENST00000456064 1369 ntBASIC14.83□□□□□ -0.04
RFC3P40938 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 AC005622.1-201ENST00000636801 1703 ntBASIC14.83□□□□□ -0.04
RFC3P40938 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.83□□□□□ -0.04
RFC3P40938 AC008741.2-201ENST00000612792 3115 ntBASIC14.83□□□□□ -0.04
RFC3P40938 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFC3P40938 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RFC3P40938 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFC3P40938 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 AC015922.1-201ENST00000421102 1152 ntBASIC14.82□□□□□ -0.04
RFC3P40938 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.82□□□□□ -0.04
RFC3P40938 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.82□□□□□ -0.04
RFC3P40938 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.82□□□□□ -0.04
RFC3P40938 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.82□□□□□ -0.04
RFC3P40938 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.82□□□□□ -0.04
RFC3P40938 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.82□□□□□ -0.04
RFC3P40938 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.82□□□□□ -0.04
RFC3P40938 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.82□□□□□ -0.04
RFC3P40938 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.82□□□□□ -0.04
RFC3P40938 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.82□□□□□ -0.04
RFC3P40938 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.82□□□□□ -0.04
RFC3P40938 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFC3P40938 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
RFC3P40938 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.81□□□□□ -0.04
RFC3P40938 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RFC3P40938 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFC3P40938 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
RFC3P40938 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms