Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.81□□□□□ -0.2
CDKN1AP38936 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.81□□□□□ -0.2
CDKN1AP38936 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.81□□□□□ -0.2
CDKN1AP38936 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.81□□□□□ -0.2
CDKN1AP38936 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.81□□□□□ -0.2
CDKN1AP38936 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.81□□□□□ -0.2
CDKN1AP38936 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDKN1AP38936 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.81□□□□□ -0.2
CDKN1AP38936 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 DGCR5-201ENST00000399539 862 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 SERBP1P3-201ENST00000459980 809 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.8□□□□□ -0.2
CDKN1AP38936 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.8□□□□□ -0.2
CDKN1AP38936 AC061975.2-201ENST00000581722 295 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.8□□□□□ -0.2
CDKN1AP38936 AC026979.3-201ENST00000607315 403 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 AC004790.1-201ENST00000612686 536 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 BTBD7P1-201ENST00000447253 1453 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CDKN1AP38936 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDKN1AP38936 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.8□□□□□ -0.2
CDKN1AP38936 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.8□□□□□ -0.2
CDKN1AP38936 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDKN1AP38936 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 AL603756.1-201ENST00000606511 2163 ntBASIC13.79□□□□□ -0.2
CDKN1AP38936 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.79□□□□□ -0.2
CDKN1AP38936 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDKN1AP38936 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDKN1AP38936 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDKN1AP38936 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDKN1AP38936 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDKN1AP38936 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.79□□□□□ -0.2
CDKN1AP38936 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDKN1AP38936 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDKN1AP38936 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN1AP38936 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms