Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NORAD-201ENST00000565493 5339 ntBASIC17.73■□□□□ 0.43
KRT9P35527 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT9P35527 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT9P35527 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KRT9P35527 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
KRT9P35527 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 ZNF259P1-201ENST00000407656 1365 ntBASIC17.72■□□□□ 0.43
KRT9P35527 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 RNU1-129P-201ENST00000384064 167 ntBASIC17.72■□□□□ 0.43
KRT9P35527 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT9P35527 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT9P35527 U1.21-201ENST00000580816 167 ntBASIC17.72■□□□□ 0.43
KRT9P35527 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.72■□□□□ 0.43
KRT9P35527 AC021097.1-201ENST00000607902 574 ntBASIC17.72■□□□□ 0.43
KRT9P35527 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 BX640515.1-201ENST00000617215 977 ntBASIC17.72■□□□□ 0.43
KRT9P35527 AC007064.4-201ENST00000637740 555 ntBASIC17.72■□□□□ 0.43
KRT9P35527 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.72■□□□□ 0.43
KRT9P35527 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT9P35527 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KRT9P35527 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT9P35527 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT9P35527 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KRT9P35527 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 RHOQP3-201ENST00000437982 621 ntBASIC17.71■□□□□ 0.43
KRT9P35527 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT9P35527 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT9P35527 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 AC023141.13-201ENST00000604991 943 ntBASIC17.71■□□□□ 0.43
KRT9P35527 AC064836.3-201ENST00000607928 673 ntBASIC17.71■□□□□ 0.43
KRT9P35527 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KRT9P35527 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 AC136621.1-201ENST00000624017 2304 ntBASIC17.71■□□□□ 0.43
KRT9P35527 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT9P35527 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT9P35527 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT9P35527 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT9P35527 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT9P35527 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
KRT9P35527 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms