Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC6A4P31645 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SLC6A4P31645 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC6A4P31645 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A4P31645 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A4P31645 SPDYE18-201ENST00000510091 1050 ntBASIC16.52■□□□□ 0.24
SLC6A4P31645 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC6A4P31645 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A4P31645 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A4P31645 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC6A4P31645 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A4P31645 MIR6069-201ENST00000620069 79 ntBASIC16.52■□□□□ 0.24
SLC6A4P31645 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SLC6A4P31645 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
SLC6A4P31645 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC6A4P31645 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A4P31645 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC6A4P31645 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC6A4P31645 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SLC6A4P31645 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 AP001282.1-201ENST00000531301 1499 ntBASIC16.51■□□□□ 0.23
SLC6A4P31645 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 MIR648-201ENST00000385046 94 ntBASIC16.51■□□□□ 0.23
SLC6A4P31645 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 FO393414.2-201ENST00000405153 598 ntBASIC16.51■□□□□ 0.23
SLC6A4P31645 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC6A4P31645 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC6A4P31645 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A4P31645 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A4P31645 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A4P31645 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 AC135586.1-201ENST00000539323 574 ntBASIC16.51■□□□□ 0.23
SLC6A4P31645 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SLC6A4P31645 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A4P31645 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC6A4P31645 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A4P31645 AL109936.8-201ENST00000641772 604 ntBASIC16.51■□□□□ 0.23
SLC6A4P31645 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A4P31645 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SLC6A4P31645 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC6A4P31645 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
SLC6A4P31645 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A4P31645 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC6A4P31645 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC6A4P31645 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A4P31645 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms